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Volume 44 Issue 5
May  2022
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SUN Junmei, GE Qingqing, LI Xiumei, ZHAO Baoqi. A Medical Image Segmentation Network with Boundary Enhancement[J]. Journal of Electronics & Information Technology, 2022, 44(5): 1643-1652. doi: 10.11999/JEIT210784
Citation: SUN Junmei, GE Qingqing, LI Xiumei, ZHAO Baoqi. A Medical Image Segmentation Network with Boundary Enhancement[J]. Journal of Electronics & Information Technology, 2022, 44(5): 1643-1652. doi: 10.11999/JEIT210784

A Medical Image Segmentation Network with Boundary Enhancement

doi: 10.11999/JEIT210784
Funds:  The National Natural Science Foundation of China (61801159, 61571174), The Open Fund of Engineering Research Center for Software Testing and Evaluation of Fujian Province (ST2019004), The Science and Technology Plan Project of Hangzhou (20201203B124)
  • Received Date: 2021-08-06
  • Accepted Date: 2021-12-14
  • Rev Recd Date: 2021-12-10
  • Available Online: 2021-12-26
  • Publish Date: 2022-05-25
  • A medical image segmentation network with boundary enhancement, named as the AS-UNet (Add-and-Subtract UNet), is proposed to solve the problems of traditional segmentation networks for medical images, such as unclear boundary segmentation and large missing value. The mask boundary image is obtained by using the mask boundary image extraction algorithm, and the Boundary Attention Block (BAB) with multi-scale feature maps is introduced into the last three layers of the UNet expansion path. Moreover, the combinatorial loss function is proposed to improve the segmentation accuracy. In testing, the BAB can be abandoned to reduce testing parameters. Comparisons with other segmentation methods on three different types of medical image segmentation datasets, Glas, DRIVE and ISIC2018 are provided, indicating that the segmentation performance of the AS-UNet is better.
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  • [1]
    GENG Qichuan, ZHOU Zhong, and CAO Xiaochun. Survey of recent progress in semantic image segmentation with CNNs[J]. Science China Information Sciences, 2018, 61(5): 051101. doi: 10.1007/s11432-017-9189-6
    [2]
    ANWAR S M, MAJID M, QAYYUM A, et al. Medical image analysis using convolutional neural networks: A review[J]. Journal of Medical Systems, 2018, 42(11): 226. doi: 10.1007/s10916-018-1088-1
    [3]
    徐莹莹, 沈红斌. 基于模式识别的生物医学图像处理研究现状[J]. 电子与信息学报, 2020, 42(1): 201–213. doi: 10.11999/JEIT190657

    XU Yingying and SHEN Hongbin. Review of research on biomedical image processing based on pattern recognition[J]. Journal of Electronics &Information Technology, 2020, 42(1): 201–213. doi: 10.11999/JEIT190657
    [4]
    RONNEBERGER O, FISCHER P, and BROX T. U-Net: Convolutional networks for biomedical image segmentation[C]. The 18th International Conference on Medical Image Computing and Computer-Assisted Intervention, Munich, Germany, 2015: 234–241.
    [5]
    SHANKARANARAYANA S M, RAM K, MITRA K, et al. Joint optic disc and cup segmentation using fully convolutional and adversarial networks[C]. International Workshop on Ophthalmic Medical Image Analysis, Québec City, Canada, 2017: 168–176.
    [6]
    OKTAY O, SCHLEMPER J, LE FOLGOC L, et al. Attention U-Net: Learning where to look for the pancreas[EB/OL]. https://arxiv.org/abs/1804.03999.pdf, 2021.
    [7]
    ZHOU Zongwei, SIDDIQUEE M R, TAJBAKHSH N, et al. Unet++: Redesigning skip connections to exploit multiscale features in image segmentation[J]. IEEE Transactions on Medical Imaging, 2020, 39(6): 1856–1867. doi: 10.1109/TMI.2019.2959609
    [8]
    JAFARI M, AUER D, FRANCIS S, et al. DRU-Net: An efficient deep convolutional neural network for medical image segmentation[C]. The 2020 IEEE 17th International Symposium on Biomedical Imaging, Iowa City, USA, 2020: 1144–1148.
    [9]
    HE Kaiming, ZHANG Xiangyu, REN Shaoqing, et al. Deep residual learning for image recognition[C]. 2016 IEEE Conference on Computer Vision and Pattern Recognition, Las Vegas, USA, 2016: 770–778.
    [10]
    HUANG Zehao and WANG Naiyan. Like what you like: Knowledge distill via neuron selectivity transfer[EB/OL]. https://arxiv.org/abs/1707.01219.pdf, 2021.
    [11]
    LI Ziqiang, PAN Hong, ZHU Yaping, et al. PGD-UNet: A position-guided deformable network for simultaneous segmentation of organs and tumors[C]. 2020 International Joint Conference on Neural Networks, Glasgow, UK, 2020: 1–8.
    [12]
    KITRUNGROTSAKUL T, YUTARO I, LIN Lanfen, et al. Interactive deep refinement network for medical image segmentation[EB/OL]. https://arxiv.org/pdf/2006.15320.pdf, 2021.
    [13]
    ZHANG Zhijie, FU Huazhu, DAI Hang, et al. ET-Net: A Generic edge-aTtention guidance network for medical image segmentation[C]. The 22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, Shenzhen, China, 2019: 442–450.
    [14]
    VALANARASU J M J, SINDAGI V A, HACIHALILOGLU I, et al. KiU-Net: Towards accurate segmentation of biomedical images using over-complete representations[C]. The 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, Lima, Peru, 2020: 363–373.
    [15]
    LEE H J, KIM J U, LEE S, et al. Structure boundary preserving segmentation for medical image with ambiguous boundary[C]. 2020 IEEE/CVF Conference on Computer Vision and Pattern Recognition, Seattle, USA, 2020: 4816–4825.
    [16]
    CHU Jiajia, CHEN Yajie, ZHOU Wei, et al. Pay more attention to discontinuity for medical image segmentation[C]. The 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, Lima, Peru, 2020: 166–175.
    [17]
    BAHETI B, INNANI S, GAJRE S, et al. Eff-UNet: A novel architecture for semantic segmentation in unstructured environment[C]. 2020 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops, Seattle, USA, 2020: 1473–1481.
    [18]
    TREBING K, STAǸCZYK T, and MEHRKANOON S. SmaAT-UNet: Precipitation nowcasting using a small attention-UNet architecture[J]. Pattern Recognition Letters, 2021, 145: 178–186. doi: 10.1016/j.patrec.2021.01.036
    [19]
    QAMAR S, JIN Hai, ZHENG Ran, et al. A variant form of 3D-UNet for infant brain segmentation[J]. Future Generation Computer Systems, 2020, 108: 613–623. doi: 10.1016/j.future.2019.11.021
    [20]
    GADOSEY P K, LI Yujian, AGYEKUM E A, et al. SD-UNet: Stripping down U-Net for segmentation of biomedical images on platforms with low computational budgets[J]. Diagnostics, 2020, 10(2): 110. doi: 10.3390/diagnostics10020110
    [21]
    SUN J, DARBEHANI F, ZAIDI M, et al. SAUNet: Shape attentive U-Net for interpretable medical image segmentation[C]. The 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, Lima, Peru, 2020: 797–806.
    [22]
    TAKIKAWA T, ACUNA D, JAMPANI V, et al. Gated-SCNN: Gated shape CNNS for semantic segmentation[C]. 2019 IEEE/CVF International Conference on Computer Vision, Seoul, Korea (South), 2019: 5228–5237.
    [23]
    HEIDLER K, MOU Lichao, BAUMHOER C, et al. HED-UNet: Combined segmentation and edge detection for monitoring the Antarctic coastline[EB/OL]. https://arxiv.org/abs/2103.01849v1.pdf, 2021.
    [24]
    JADON S. A survey of loss functions for semantic segmentation[C]. 2020 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, Via del Mar, Chile, 2020: 1–7.
    [25]
    KERVADEC H, BOUCHTIBA J, DESROSIERS C, et al. Boundary loss for highly unbalanced segmentation[J]. Medical Image Analysis, 2021, 67: 101851. doi: 10.1016/j.media.2020.101851
    [26]
    ROY A G, NAVAB N, and WACHINGER C. Concurrent spatial and channel ‘squeeze & excitation’ in fully convolutional networks[C]. The 21st International Conference on Medical Image Computing and Computer-Assisted Intervention, Granada, Spain, 2018: 421–429.
    [27]
    CODELLA N, ROTEMBERG V, TSCHANDL P, et al. Skin lesion analysis toward melanoma detection 2018: A challenge hosted by the international skin imaging collaboration (ISIC)[EB/OL]. https://arxiv.org/abs/1902.03368.pdf, 2021.
    [28]
    TSCHANDL P, ROSENDAHL C, and KITTLER H. The HAM10000 dataset, a large collection of multi-source dermatoscopic images of common pigmented skin lesions[J]. Scientific Data, 2018, 5: 180161. doi: 10.1038/sdata.2018.161
    [29]
    MILLETARI F, NAVAB N, and AHMADI S A. V-Net: Fully convolutional neural networks for volumetric medical image segmentation[C]. The 2016 4th International Conference on 3D Vision, Stanford, USA, 2016: 565–571.
    [30]
    ATTOUCH H, LUCCHETTI R, and WETS R J B. The topology of the ρ-hausdorff distance[J]. Annali di Matematica Pura ed Applicata, 1991, 160(1): 303–320. doi: 10.1007/BF01764131
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